Gene

These reference sequences exist independently of genome builds. Explain

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These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

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Genomic

  1. NG_007107.3 RefSeqGene

    Range 44387..120531 Download GenBank, FASTA, Sequence Viewer (Graphics), LRG_764

mRNA and Protein(s)

  1. NM_001110792.2 → NP_001104262.1 methyl-CpG-binding protein 2 isoform 2

    See identical proteins and their annotated locations for NP_001104262.1

    Status: REVIEWED

    Description Transcript Variant: This variant (2), also known as MECP2B, lacks exon 2. Translation is reported to initiate in the first exon resulting in a protein isoform (2) with a distinct N-terminus. This transcript is reported to be abundant in the central nervous system (PMID: 15034579, 17171659). Source sequence(s) AF030876, BC011612, BX538060, U52112 Consensus CDS CCDS48193.1 UniProtKB/TrEMBL A0A140VKC4, C6KG45, D0UU70, D5L9I5, D9ZNA4, E9LUH3 Related ENSP00000395535.2, ENST00000453960.7 Conserved Domains (1) summary smart00391Location:104 → 181 MBD; Methyl-CpG binding domain

  2. NM_001316337.2 → NP_001303266.1 methyl-CpG-binding protein 2 isoform 3

    Status: REVIEWED

    Description Transcript Variant: This variant (3) includes exon 2 and an additional exon, resulting in the use of a downstream start codon, compared to variant 1. The encoded isoform (3) has a shorter N-terminus compared to isoform 1. Variants 3-7 all encode the same isoform (3). Source sequence(s) AB209464, AF030876, BC011612, BI767019, U52112 UniProtKB/TrEMBL D5L9I5 Conserved Domains (1) summary smart00391Location:1 → 76 MBD; Methyl-CpG binding domain

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    NM_001369391.2 → NP_001356320.1 methyl-CpG-binding protein 2 isoform 3

    Status: REVIEWED

    Description Transcript Variant: This variant (4) includes exon 2 and some additional exons, resulting in the use of a downstream start codon, compared to variant 1. The encoded isoform (3) has a shorter N-terminus compared to isoform 1. Variants 3-7 all encode the same isoform (3). Source sequence(s) AC244097, AF030876, U52112 UniProtKB/TrEMBL D5L9I5 Conserved Domains (1) summary smart00391Location:1 → 76 MBD; Methyl-CpG binding domain

  4. NM_001369392.2 → NP_001356321.1 methyl-CpG-binding protein 2 isoform 3

    Status: REVIEWED

    Description Transcript Variant: This variant (5) includes exon 2 and an additional exon, resulting in the use of a downstream start codon, compared to variant 1. The encoded isoform (3) has a shorter N-terminus compared to isoform 1. Variants 3-7 all encode the same isoform (3). Source sequence(s) AC244097, AF030876, U52112 UniProtKB/TrEMBL D5L9I5 Conserved Domains (1) summary smart00391Location:1 → 76 MBD; Methyl-CpG binding domain

  5. NM_001369393.2 → NP_001356322.1 methyl-CpG-binding protein 2 isoform 3

    Status: REVIEWED

    Description Transcript Variant: This variant (6) lacks exon 2 and contains an additional exon, resulting in the use of a downstream start codon, compared to variant 1. The encoded isoform (3) has a shorter N-terminus compared to isoform 1. Variants 3-7 all encode the same isoform (3). Source sequence(s) AC244097, AF030876, U52112 UniProtKB/TrEMBL D5L9I5 Conserved Domains (1) summary smart00391Location:1 → 76 MBD; Methyl-CpG binding domain

  6. NM_001369394.2 → NP_001356323.1 methyl-CpG-binding protein 2 isoform 3

    Status: REVIEWED

    Description Transcript Variant: This variant (7) differs in the 5′ UTR and coding sequence, compared to variant 1. The encoded isoform (3) has a shorter N-terminus compared to isoform 1. Variants 3-7 all encode the same isoform (3). Source sequence(s) AC244097, AF030876, U52112 UniProtKB/TrEMBL D5L9I5 Conserved Domains (1) summary smart00391Location:1 → 76 MBD; Methyl-CpG binding domain

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    NM_001386137.1 → NP_001373066.1 methyl-CpG-binding protein 2 isoform 4

    Status: REVIEWED

    Source sequence(s) AC244097, AF030876, U52112

  8. NM_001386138.1 → NP_001373067.1 methyl-CpG-binding protein 2 isoform 4

    Status: REVIEWED

    Source sequence(s) AC244097, AF030876, U52112

  9. NM_001386139.1 → NP_001373068.1 methyl-CpG-binding protein 2 isoform 4

    Status: REVIEWED

    Source sequence(s) AC244097, AF030876, U52112

  10. NM_004992.4 → NP_004983.1 methyl-CpG-binding protein 2 isoform 1

    See identical proteins and their annotated locations for NP_004983.1

    Status: REVIEWED

    Description Transcript Variant: This variant (1), also known as MECP2A, includes exon 2. Translation is reported to initiate in exon 2 resulting in a protein isoform (1) with a distinct N-terminus. Source sequence(s) AC244097, AF030876, U52112 Consensus CDS CCDS14741.1 UniProtKB/Swiss-Prot O15233, P51608, Q6QHH9, Q7Z384 UniProtKB/TrEMBL C6KG45, D0UU70, D3YJ43, D5L9I5, D9ZNA4, E9LUH3 Related ENSP00000301948.6, ENST00000303391.11 Conserved Domains (1) summary smart00391Location:92 → 169 MBD; Methyl-CpG binding domain

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This post was last modified on Tháng mười một 21, 2024 3:26 chiều

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